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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908772.1_cds_XP_016458964.1_52545
CDS Infomation

[gene=LOC107782587] [db_xref=GeneID:107782587] [protein=metalloendoproteinase 4-MMP-like] [protein_id=XP_016458964.1] [location=complement(10579..11649)] [gbkey=CDS]
Sequence

ATGTCTCCGTTTCCAAGTTATTATTACACTTTTGCTCTATTCATTCTCCTCCTTTCACTT
CCTTCTTTTCCCGCCAGAATCCTAAAACACGATCCTTTAACTGAATTAACCGCCGATATT
CAAAACAACACGTGGCACGCTTTCGTTAAATTCCTCGACGCCGGAAAAGGCAGTGAACTC
CCCGGCATGTCGGAGCTCAAAAAATACTTCCAACGCTTTGGCTATCTGACTAATATTCCC
GATCATAATTTCACCGATTTTTTCGACGAAGACTTAGAGTCTGCAGTACTCAATTACCAA
AAAAACCTCGGATTAACAGTCACCGGAAAATTAGACGACGAAACGATGAACGAAATTATG
TTGCCGCGTTGTGGGATGAGTGATTCAGCTCATGAACACGATCACAGCTCGTTACATACA
ACGAGAAATTACGCGTATTTTTACGGGCGACCTAGGTGGATGAAGTCATCGCCGATGATT
TTATCGTACGCTTTCTCTGAAAATTACATGATTGATTATATAGATATCTCGGAGATTAAA
TCGGCTTTTAAAAGAGCGTTTTCGCGGTGGTCGTCAGCGATTCCGGTGAATTTCACGGAG
GCGGAGGATTACTACAAGGCGGATATTAAAATCGGGTTTTTTAGAGGCGATCACGGCGAC
GGAGAGCCGTTTGACGGAGTGTTGGGAGTGTTAGCTCACGCTTTCTCGCCGGAAAATGGG
AGGTTTCATTTAGACGCAGCGGAAACGTGGGCCGTTGATTTTGATGAAGAGAGGTCGAGA
GTTGCCGTTGATTTGGAATCAGTGGCGACCCATGAGATTGGGCATGTACTTGGGCTGGCT
CATTCTTCGGTTAAAGATGCTGTTATGTACCCAAGTTTAAGCCCAAGAATGAAGAAAAGG
GACTTGAAGCTAGATGACGTGGAAGGGGTCCAAGCTTTATATGGGTCAAACCCGAATTTC
AAATACACGTCATCGTTGGAACATGACACGTCAGCATCAAGTTGGAGAACGTCATCAAAG
TGGACCACTTTTTTTGGCTTGGTGGCTTTGATCTTTTCCTTATGTTTATGA

Peptide Sequence

PEP ID

XP_016458964.1
PEP Infomation

PREDICTED: metalloendoproteinase 4-MMP-like [Nicotiana tabacum]
Sequence

MSPFPSYYYTFALFILLLSLPSFPARILKHDPLTELTADIQNNTWHAFVKFLDAGKGSEL
PGMSELKKYFQRFGYLTNIPDHNFTDFFDEDLESAVLNYQKNLGLTVTGKLDDETMNEIM
LPRCGMSDSAHEHDHSSLHTTRNYAYFYGRPRWMKSSPMILSYAFSENYMIDYIDISEIK
SAFKRAFSRWSSAIPVNFTEAEDYYKADIKIGFFRGDHGDGEPFDGVLGVLAHAFSPENG
RFHLDAAETWAVDFDEERSRVAVDLESVATHEIGHVLGLAHSSVKDAVMYPSLSPRMKKR
DLKLDDVEGVQALYGSNPNFKYTSSLEHDTSASSWRTSSKWTTFFGLVALIFSLCL

Transcript Sequence

Gene sequence data has not been registered.